BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A10SP1|AL428318
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1596 1721 0.0
>3x_Contig1596
Length = 11686
Score = 1721 bits (866), Expect = 0.0
Identities = 878/882 (99%), Gaps = 1/882 (0%)
Strand = Plus / Minus
Query: 1 gatcacgatacctttgggaatatcatctttgttactattatttggaatccctcattacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3427 gatcacgatacctttgggaatatcatctttgttactattatttggaatccctcattacta 3368
Query: 61 tatccactgggaaagctactattataaaggacatccgattttacagcagtgggacgctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3367 tatccactgggaaagctactattataaaggacatccgattttacagcagtgggacgctga 3308
Query: 121 aaaaccaatattagattagttattaggattctgttaacatttacatttcattgactgcmt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3307 aaaaccaatattagattagttattaggattctgttaacatttacatttcattgactgcat 3248
Query: 181 tgatatcaatgcacataaaatatacgtactcattgtaaataatataaagataaagcgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3247 tgatatcaatgcacataaaatatacgtactcattgtaaataatataaagataaagcgcat 3188
Query: 241 tctctttttttttatttattacaattggacaactactagatatgtcgaataaacgaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3187 tctctttttttttatttattacaattggacaactactagatatgtcgaataaacgaccct 3128
Query: 301 tatctggctgagtaaagtaatcgcatttactcaataaatgcaccaccagccaaaactagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 tatctggctgagtaaagtaatcgcatttactcaataaatgcaccaccagccaaaactagg 3068
Query: 361 ttcgttcttgtgaattttactttgtgaattgctgttttctttgtatggracgaagccatc 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3067 ttcgttcttgtgaattttactttgtgaattgctgttttctttgtatggaacgaagccatc 3008
Query: 421 aaatcctgagttggtattactgcccgcctacgtccgaattctttgatatcgttatttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 aaatcctgagttggtattactgcccgcctacgtccgaattctttgatatcgttatttaca 2948
Query: 481 ctgagttccatatctcctgaatacgtgttgaattgttgttccggctccattccaggctcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 ctgagttccatatctcctgaatacgtgttgaattgttgttccggctccattccaggctcg 2888
Query: 541 tttgtsaacctctttatatcccaaactctaacactttgatccgcaccacctgttactaga 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 tttgtaaacctctttatatcccaaactctaacactttgatccgcaccacctgttactaga 2828
Query: 601 cagttaccttctttgttaaaagttatggaatagataggattcttaccgtgacccttcatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 cagttaccttctttgttaaaagttatggaatagataggattcttaccgtgacccttcatc 2768
Query: 661 tgtttgattcttttaccagtaccaatatcccatacgataattgtgccatcctcactgccc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 tgtttgattcttttaccagtaccaatatcccatacgataattgtgccatcctcactgccc 2708
Query: 721 gtagttaaccacctaccgtcaggcgatacttcaagtgcggtgactggtgatgtatgtccc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 gtagttaaccacctaccgtcaggcgatacttcaagtgcggtgactggtgatgtatgtccc 2648
Query: 781 aaaaacagtctaacagaatcacctgttttgaatatcccacatacggcacgttttgtcgct 840
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2647 aaaaacagtctaacagaatcacctg-tttgaatatcccacatacggcacgttttgtcgct 2589
Query: 841 ggaaccagtgaaaacatagcaaccatttggatggaaagtgct 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2588 ggaaccagtgaaaacatagcaaccatttggatggaaagtgct 2547
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7318
Number of Sequences: 1807
Number of extensions: 7318
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)